Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Mir125a-201ENSMUST00000083545 68 ntBASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lmcd1Q8VEE1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm18307-201ENSMUST00000206864 949 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lmcd1Q8VEE1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Lmcd1Q8VEE1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lmcd1Q8VEE1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lmcd1Q8VEE1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms