Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx39aQ8VDW0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx39aQ8VDW0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Gm27306-201ENSMUST00000183970 107 ntBASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx39aQ8VDW0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Gm9719-201ENSMUST00000162765 543 ntBASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Mir8102-201ENSMUST00000184148 139 ntBASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx39aQ8VDW0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ddx39aQ8VDW0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms