Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Gm13036-201ENSMUST00000117799 748 ntBASIC14.19□□□□□ -0.14
Rnf8Q8VC56 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Gm7787-201ENSMUST00000216858 688 ntBASIC14.19□□□□□ -0.14
Rnf8Q8VC56 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Rnf8Q8VC56 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Gm1401-201ENSMUST00000122048 772 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf8Q8VC56 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms