Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Top1mtQ8R4U6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Gm15467-201ENSMUST00000120582 445 ntBASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Rpph1-201ENSMUST00000175096 319 ntBASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Top1mtQ8R4U6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Gm15427-201ENSMUST00000117288 531 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Gm14494-201ENSMUST00000118786 435 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Gm6443-201ENSMUST00000203599 874 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Olfr286-202ENSMUST00000205305 969 ntBASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Top1mtQ8R4U6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Top1mtQ8R4U6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Top1mtQ8R4U6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms