Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf7Q8R0S1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf7Q8R0S1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atf7Q8R0S1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.32■□□□□ 0.36
Atf7Q8R0S1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf7Q8R0S1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Gm15483-201ENSMUST00000120338 456 ntBASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Gm15467-201ENSMUST00000120582 445 ntBASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
Atf7Q8R0S1 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.3■□□□□ 0.36
Atf7Q8R0S1 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms