Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.5□□□□□ -0.09
Treml1Q8K558 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Treml1Q8K558 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Treml1Q8K558 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Treml1Q8K558 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Treml1Q8K558 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Treml1Q8K558 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.49□□□□□ -0.09
Treml1Q8K558 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.49□□□□□ -0.09
Treml1Q8K558 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.49□□□□□ -0.09
Treml1Q8K558 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Treml1Q8K558 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Treml1Q8K558 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Treml1Q8K558 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Treml1Q8K558 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Treml1Q8K558 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.48□□□□□ -0.09
Treml1Q8K558 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.48□□□□□ -0.09
Treml1Q8K558 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.48□□□□□ -0.09
Treml1Q8K558 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.48□□□□□ -0.09
Treml1Q8K558 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Treml1Q8K558 Gm5867-201ENSMUST00000063197 592 ntBASIC14.48□□□□□ -0.09
Treml1Q8K558 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Treml1Q8K558 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Treml1Q8K558 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Gm6973-201ENSMUST00000117080 721 ntBASIC14.47□□□□□ -0.09
Treml1Q8K558 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.47□□□□□ -0.09
Treml1Q8K558 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Gm6736-201ENSMUST00000166583 948 ntBASIC14.47□□□□□ -0.09
Treml1Q8K558 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Treml1Q8K558 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.47□□□□□ -0.09
Treml1Q8K558 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.47□□□□□ -0.09
Treml1Q8K558 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.47□□□□□ -0.09
Treml1Q8K558 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Treml1Q8K558 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Treml1Q8K558 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Treml1Q8K558 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.46□□□□□ -0.09
Treml1Q8K558 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Treml1Q8K558 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Treml1Q8K558 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms