Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.98■□□□□ 0.47
Sf3a1Q8K4Z5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm13365-201ENSMUST00000121188 973 ntBASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm18057-201ENSMUST00000208220 503 ntBASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sf3a1Q8K4Z5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Rprl2-201ENSMUST00000157150 290 ntBASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Gm43575-201ENSMUST00000196420 516 ntBASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Sf3a1Q8K4Z5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.96■□□□□ 0.46
Sf3a1Q8K4Z5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sf3a1Q8K4Z5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Chchd1-203ENSMUST00000224633 557 ntBASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sf3a1Q8K4Z5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms