Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.08■□□□□ 0.65
Ddx54Q8K4L0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Gm8565-201ENSMUST00000183259 1014 ntBASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Ddx54Q8K4L0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Gm38241-201ENSMUST00000192641 898 ntBASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.07■□□□□ 0.64
Ddx54Q8K4L0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Gm29649-201ENSMUST00000185649 419 ntBASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Gm8463-201ENSMUST00000208573 613 ntBASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 AC159747.1-201ENSMUST00000219903 265 ntBASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx54Q8K4L0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Gm5187-201ENSMUST00000117317 991 ntBASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx54Q8K4L0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gm8749-201ENSMUST00000117737 331 ntBASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx54Q8K4L0 Gm29127-201ENSMUST00000188304 517 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms