Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm17150-201ENSMUST00000165577 381 ntBASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rtn4rl1Q8K0S5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm6266-201ENSMUST00000203844 806 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm19220-201ENSMUST00000222682 803 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rtn4rl1Q8K0S5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm15806-201ENSMUST00000120696 955 ntBASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm18062-201ENSMUST00000208020 547 ntBASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm18055-201ENSMUST00000208254 547 ntBASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rtn4rl1Q8K0S5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rtn4rl1Q8K0S5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms