Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc28bQ8CEG5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm27742-201ENSMUST00000184667 60 ntBASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc28bQ8CEG5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Rubie-203ENSMUST00000227803 2430 ntBASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccdc28bQ8CEG5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Gm27867-201ENSMUST00000184778 125 ntBASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc28bQ8CEG5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc28bQ8CEG5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms