Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trim52Q8CDV4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Gm12882-201ENSMUST00000121696 517 ntBASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Gm33320-201ENSMUST00000192232 530 ntBASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Gm9794-201ENSMUST00000202370 423 ntBASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim52Q8CDV4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Trim52Q8CDV4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm12585-201ENSMUST00000117307 290 ntBASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm15460-201ENSMUST00000118147 391 ntBASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm14928-201ENSMUST00000120198 477 ntBASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm12490-201ENSMUST00000120255 560 ntBASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim52Q8CDV4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim52Q8CDV4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Gm10766-202ENSMUST00000194123 606 ntBASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Gm7653-201ENSMUST00000214567 508 ntBASIC18.01■□□□□ 0.47
Trim52Q8CDV4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms