Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.49■□□□□ 0.07
Uba3Q8C878 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm6736-201ENSMUST00000166583 948 ntBASIC15.49■□□□□ 0.07
Uba3Q8C878 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm43575-201ENSMUST00000196420 516 ntBASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Uba3Q8C878 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.48■□□□□ 0.07
Uba3Q8C878 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Gm2756-201ENSMUST00000195851 400 ntBASIC15.48■□□□□ 0.07
Uba3Q8C878 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.48■□□□□ 0.07
Uba3Q8C878 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Uba3Q8C878 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Uba3Q8C878 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Gm8749-201ENSMUST00000117737 331 ntBASIC15.47■□□□□ 0.07
Uba3Q8C878 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.47■□□□□ 0.07
Uba3Q8C878 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Gm9726-201ENSMUST00000180321 678 ntBASIC15.47■□□□□ 0.07
Uba3Q8C878 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.47■□□□□ 0.07
Uba3Q8C878 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Uba3Q8C878 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Uba3Q8C878 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Uba3Q8C878 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Uba3Q8C878 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Uba3Q8C878 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.46■□□□□ 0.07
Uba3Q8C878 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Uba3Q8C878 Gm23935-201ENSMUST00000102303 57 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 Gm24270-201ENSMUST00000102326 57 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 Mir1895-201ENSMUST00000122615 79 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 Gm24245-201ENSMUST00000157318 57 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 Gm27920-201ENSMUST00000183953 96 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 Gm18057-201ENSMUST00000208220 503 ntBASIC15.46■□□□□ 0.07
Uba3Q8C878 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms