Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ptcd1Q8C2E4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Gm13829-201ENSMUST00000119600 138 ntBASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptcd1Q8C2E4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm4875-201ENSMUST00000118257 786 ntBASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm42612-201ENSMUST00000197986 623 ntBASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm43170-201ENSMUST00000199827 612 ntBASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gm9899-201ENSMUST00000065519 555 ntBASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ptcd1Q8C2E4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Gm15824-201ENSMUST00000119516 955 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Gm46209-201ENSMUST00000217912 553 ntBASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptcd1Q8C2E4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptcd1Q8C2E4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms