Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Olfr286-202ENSMUST00000205305 969 ntBASIC16.28■□□□□ 0.2
Trim47Q8C0E3 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim47Q8C0E3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gm15920-201ENSMUST00000118998 402 ntBASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gm22175-201ENSMUST00000175007 78 ntBASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim47Q8C0E3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim47Q8C0E3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gm7063-201ENSMUST00000186840 981 ntBASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim47Q8C0E3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim47Q8C0E3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms