Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Mir3113-201ENSMUST00000175478 76 ntBASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trub1Q8C0D0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Gm15427-201ENSMUST00000117288 531 ntBASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Gm27525-201ENSMUST00000184465 107 ntBASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trub1Q8C0D0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Gm15483-201ENSMUST00000120338 456 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trub1Q8C0D0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms