Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rd3Q8BRE0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rd3Q8BRE0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rd3Q8BRE0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rd3Q8BRE0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rd3Q8BRE0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Gm5566-201ENSMUST00000116118 459 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Gm45098-201ENSMUST00000207179 657 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rd3Q8BRE0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Syt7-204ENSMUST00000223586 1344 ntBASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Gm14719-201ENSMUST00000121891 340 ntBASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.55■□□□□ 0.08
Rd3Q8BRE0 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.55■□□□□ 0.08
Rd3Q8BRE0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rd3Q8BRE0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Gm27680-201ENSMUST00000184192 160 ntBASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rd3Q8BRE0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rd3Q8BRE0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms