Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp2bQ8BJF9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp2bQ8BJF9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2bQ8BJF9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2bQ8BJF9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.05■□□□□ -0
Chmp2bQ8BJF9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2bQ8BJF9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms