Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Slc5a7Q8BGY9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Slc5a7Q8BGY9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gm10499-201ENSMUST00000174094 934 ntBASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gm43799-201ENSMUST00000201845 579 ntBASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc5a7Q8BGY9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Slc5a7Q8BGY9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms