Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.32□□□□□ -0.12
Trim50Q810I2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim50Q810I2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim50Q810I2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim50Q810I2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim50Q810I2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim50Q810I2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim50Q810I2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.31□□□□□ -0.12
Trim50Q810I2 Gm5264-201ENSMUST00000190584 848 ntBASIC14.31□□□□□ -0.12
Trim50Q810I2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.31□□□□□ -0.12
Trim50Q810I2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Gm10175-201ENSMUST00000086013 645 ntBASIC14.31□□□□□ -0.12
Trim50Q810I2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trim50Q810I2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim50Q810I2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.3□□□□□ -0.12
Trim50Q810I2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.3□□□□□ -0.12
Trim50Q810I2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim50Q810I2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim50Q810I2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.29□□□□□ -0.12
Trim50Q810I2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Gm15427-201ENSMUST00000117288 531 ntBASIC14.29□□□□□ -0.12
Trim50Q810I2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.29□□□□□ -0.12
Trim50Q810I2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim50Q810I2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim50Q810I2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim50Q810I2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms