Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc116Q80X53 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc116Q80X53 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Gm2272-201ENSMUST00000194903 582 ntBASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc116Q80X53 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Gm14140-201ENSMUST00000119999 995 ntBASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc116Q80X53 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.38□□□□□ -0.11
Ccdc116Q80X53 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms