Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3d21Q7TSG5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3d21Q7TSG5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm44492-201ENSMUST00000197012 141 ntBASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Gm45747-201ENSMUST00000212203 999 ntBASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sh3d21Q7TSG5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Gm27525-201ENSMUST00000184465 107 ntBASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Gm8000-201ENSMUST00000188378 592 ntBASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3d21Q7TSG5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3d21Q7TSG5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d21Q7TSG5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d21Q7TSG5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3d21Q7TSG5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms