Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Gm6973-201ENSMUST00000117080 721 ntBASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm8Q6ZWM4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Gm27920-201ENSMUST00000183953 96 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Gm37230-201ENSMUST00000194491 818 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm8Q6ZWM4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Gm11543-201ENSMUST00000120758 370 ntBASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Gm18737-201ENSMUST00000173594 937 ntBASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm8Q6ZWM4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm8Q6ZWM4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms