Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snrnp40Q6PE01 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Dancr-204ENSMUST00000132389 2347 ntBASIC12.87□□□□□ -0.35
Snrnp40Q6PE01 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm12585-201ENSMUST00000117307 290 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Mir1938-201ENSMUST00000158746 100 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm9002-201ENSMUST00000178437 499 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm37230-201ENSMUST00000194491 818 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 AA619741-201ENSMUST00000195095 646 ntBASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snrnp40Q6PE01 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snrnp40Q6PE01 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms