Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf220Q6PDX6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Gm5587-201ENSMUST00000206270 674 ntBASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf220Q6PDX6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf220Q6PDX6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf220Q6PDX6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf220Q6PDX6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms