Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ParpbpQ6IRT3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ParpbpQ6IRT3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ParpbpQ6IRT3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ParpbpQ6IRT3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm27525-201ENSMUST00000184465 107 ntBASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ParpbpQ6IRT3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm11779-201ENSMUST00000118541 368 ntBASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm5177-201ENSMUST00000183092 997 ntBASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ParpbpQ6IRT3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gm15467-201ENSMUST00000120582 445 ntBASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Thap2-203ENSMUST00000218989 527 ntBASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ParpbpQ6IRT3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms