Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm2272-201ENSMUST00000194903 582 ntBASIC14.14□□□□□ -0.15
Sdc3Q64519 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.14□□□□□ -0.15
Sdc3Q64519 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sdc3Q64519 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sdc3Q64519 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sdc3Q64519 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.14□□□□□ -0.15
Sdc3Q64519 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc3Q64519 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Celf4-206ENSMUST00000224553 1729 ntBASIC14.13□□□□□ -0.15
Sdc3Q64519 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.13□□□□□ -0.15
Sdc3Q64519 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Gm18889-201ENSMUST00000174284 929 ntBASIC14.13□□□□□ -0.15
Sdc3Q64519 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.13□□□□□ -0.15
Sdc3Q64519 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Sdc3Q64519 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc3Q64519 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sdc3Q64519 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.13□□□□□ -0.15
Sdc3Q64519 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.12□□□□□ -0.15
Sdc3Q64519 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sdc3Q64519 BC037039-201ENSMUST00000192003 2205 ntBASIC14.12□□□□□ -0.15
Sdc3Q64519 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sdc3Q64519 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc3Q64519 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms