Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Gm37324-201ENSMUST00000194500 4504 ntBASIC8.25□□□□□ -1.09
Sox16Q62247 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC8.25□□□□□ -1.09
Sox16Q62247 CT025678.1-201ENSMUST00000214795 2972 ntBASIC8.25□□□□□ -1.09
Sox16Q62247 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox16Q62247 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC8.25□□□□□ -1.09
Sox16Q62247 Gm7224-201ENSMUST00000121359 2066 ntBASIC8.25□□□□□ -1.09
Sox16Q62247 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox16Q62247 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox16Q62247 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sox16Q62247 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Gm10418-201ENSMUST00000100943 576 ntBASIC8.24□□□□□ -1.09
Sox16Q62247 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
Sox16Q62247 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Sox16Q62247 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Gm44981-201ENSMUST00000205549 1943 ntBASIC8.24□□□□□ -1.09
Sox16Q62247 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox16Q62247 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox16Q62247 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox16Q62247 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
Sox16Q62247 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC8.23□□□□□ -1.09
Sox16Q62247 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox16Q62247 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox16Q62247 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox16Q62247 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms