Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Six4Q61321 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Six4Q61321 Gm11543-201ENSMUST00000120758 370 ntBASIC14.82□□□□□ -0.04
Six4Q61321 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.82□□□□□ -0.04
Six4Q61321 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Gm6736-201ENSMUST00000166583 948 ntBASIC14.82□□□□□ -0.04
Six4Q61321 Gm37230-201ENSMUST00000194491 818 ntBASIC14.82□□□□□ -0.04
Six4Q61321 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Six4Q61321 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.82□□□□□ -0.04
Six4Q61321 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Six4Q61321 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six4Q61321 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Six4Q61321 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six4Q61321 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Six4Q61321 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six4Q61321 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Gm2810-201ENSMUST00000118681 990 ntBASIC14.81□□□□□ -0.04
Six4Q61321 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.81□□□□□ -0.04
Six4Q61321 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.81□□□□□ -0.04
Six4Q61321 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.81□□□□□ -0.04
Six4Q61321 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Mir6990-201ENSMUST00000183724 91 ntBASIC14.81□□□□□ -0.04
Six4Q61321 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.81□□□□□ -0.04
Six4Q61321 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.81□□□□□ -0.04
Six4Q61321 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Six4Q61321 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six4Q61321 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Six4Q61321 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.8□□□□□ -0.04
Six4Q61321 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.8□□□□□ -0.04
Six4Q61321 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.8□□□□□ -0.04
Six4Q61321 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.8□□□□□ -0.04
Six4Q61321 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Six4Q61321 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six4Q61321 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Six4Q61321 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Six4Q61321 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.79□□□□□ -0.04
Six4Q61321 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.79□□□□□ -0.04
Six4Q61321 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.79□□□□□ -0.04
Six4Q61321 Gm43125-201ENSMUST00000201724 730 ntBASIC14.79□□□□□ -0.04
Six4Q61321 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.79□□□□□ -0.04
Six4Q61321 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.79□□□□□ -0.04
Six4Q61321 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six4Q61321 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms