Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxd3Q61060 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Foxd3Q61060 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Gm24513-201ENSMUST00000174964 138 ntBASIC13.51□□□□□ -0.25
Foxd3Q61060 Gm27397-201ENSMUST00000184997 107 ntBASIC13.51□□□□□ -0.25
Foxd3Q61060 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Foxd3Q61060 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxd3Q61060 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm6550-201ENSMUST00000187574 993 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm6089-201ENSMUST00000197666 938 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Foxd3Q61060 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.5□□□□□ -0.25
Foxd3Q61060 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxd3Q61060 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Foxd3Q61060 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Foxd3Q61060 Carlr-201ENSMUST00000181515 2574 ntBASIC13.49□□□□□ -0.25
Foxd3Q61060 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Foxd3Q61060 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxd3Q61060 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms