Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Gm18889-201ENSMUST00000174284 929 ntBASIC14.06□□□□□ -0.16
Xrcc1Q60596 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gm11543-201ENSMUST00000120758 370 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gm44335-201ENSMUST00000196879 141 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gm44297-201ENSMUST00000198304 141 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gm44346-201ENSMUST00000198851 141 ntBASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Xrcc1Q60596 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Gm8749-201ENSMUST00000117737 331 ntBASIC14.04□□□□□ -0.16
Xrcc1Q60596 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Mir6990-201ENSMUST00000183724 91 ntBASIC14.04□□□□□ -0.16
Xrcc1Q60596 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.04□□□□□ -0.16
Xrcc1Q60596 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Xrcc1Q60596 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms