Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm21880-201ENSMUST00000187275 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21826-201ENSMUST00000187451 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21198-201ENSMUST00000188393 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21749-201ENSMUST00000189343 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21901-201ENSMUST00000189568 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm29424-201ENSMUST00000189716 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm28599-201ENSMUST00000189838 694 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21867-201ENSMUST00000189917 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm29269-201ENSMUST00000190087 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21722-201ENSMUST00000190153 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm28423-201ENSMUST00000190701 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21899-201ENSMUST00000190745 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21910-201ENSMUST00000191163 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21849-201ENSMUST00000191571 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm28678-201ENSMUST00000191593 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm20910-201ENSMUST00000193268 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm37230-201ENSMUST00000194491 818 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm21871-201ENSMUST00000194621 696 ntBASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38aQ4FK66 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Gm24543-201ENSMUST00000103867 82 ntBASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Gm14767-201ENSMUST00000121559 586 ntBASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf38aQ4FK66 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38aQ4FK66 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Mir8102-201ENSMUST00000184148 139 ntBASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Gm9063-201ENSMUST00000223299 582 ntBASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38aQ4FK66 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms