Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Mir5126-201ENSMUST00000175513 77 ntBASIC15.22■□□□□ 0.03
Trim80Q3V061 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim80Q3V061 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim80Q3V061 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Trim80Q3V061 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim80Q3V061 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim80Q3V061 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim80Q3V061 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim80Q3V061 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.21■□□□□ 0.03
Trim80Q3V061 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim80Q3V061 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim80Q3V061 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim80Q3V061 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Trim80Q3V061 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim80Q3V061 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim80Q3V061 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim80Q3V061 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.2■□□□□ 0.02
Trim80Q3V061 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.2■□□□□ 0.02
Trim80Q3V061 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim80Q3V061 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.2■□□□□ 0.02
Trim80Q3V061 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim80Q3V061 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.19■□□□□ 0.02
Trim80Q3V061 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Gm5364-201ENSMUST00000216789 889 ntBASIC15.19■□□□□ 0.02
Trim80Q3V061 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Trim80Q3V061 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim80Q3V061 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms