Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brf2Q3UAW9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Brf2Q3UAW9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Brf2Q3UAW9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Brf2Q3UAW9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Brf2Q3UAW9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Brf2Q3UAW9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gm10154-201ENSMUST00000084445 354 ntBASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brf2Q3UAW9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm13464-201ENSMUST00000119418 935 ntBASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Thap2-203ENSMUST00000218989 527 ntBASIC13.82□□□□□ -0.2
Brf2Q3UAW9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms