Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp25Q3U435 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.83□□□□□ -0.2
Mmp25Q3U435 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.83□□□□□ -0.2
Mmp25Q3U435 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp25Q3U435 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.82□□□□□ -0.2
Mmp25Q3U435 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.82□□□□□ -0.2
Mmp25Q3U435 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.82□□□□□ -0.2
Mmp25Q3U435 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Gm5312-201ENSMUST00000203728 547 ntBASIC13.82□□□□□ -0.2
Mmp25Q3U435 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.82□□□□□ -0.2
Mmp25Q3U435 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp25Q3U435 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Efs-202ENSMUST00000227037 2540 ntBASIC13.81□□□□□ -0.2
Mmp25Q3U435 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm14701-201ENSMUST00000117156 348 ntBASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.81□□□□□ -0.2
Mmp25Q3U435 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.81□□□□□ -0.2
Mmp25Q3U435 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp25Q3U435 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp25Q3U435 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp25Q3U435 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp25Q3U435 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp25Q3U435 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms