Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.13□□□□□ -0.47
Trim63Q38HM4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.13□□□□□ -0.47
Trim63Q38HM4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.12□□□□□ -0.47
Trim63Q38HM4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim63Q38HM4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.11□□□□□ -0.47
Trim63Q38HM4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.11□□□□□ -0.47
Trim63Q38HM4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.11□□□□□ -0.47
Trim63Q38HM4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim63Q38HM4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms