Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.91□□□□□ -0.18
Nkx3-2P97503 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Nkx3-2P97503 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Gm43125-201ENSMUST00000201724 730 ntBASIC13.9□□□□□ -0.18
Nkx3-2P97503 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx3-2P97503 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.9□□□□□ -0.19
Nkx3-2P97503 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx3-2P97503 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx3-2P97503 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm6973-201ENSMUST00000117080 721 ntBASIC13.88□□□□□ -0.19
Nkx3-2P97503 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm13616-201ENSMUST00000120600 222 ntBASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.88□□□□□ -0.19
Nkx3-2P97503 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx3-2P97503 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms