Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sf3b6P59708 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3b6P59708 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Gm12644-201ENSMUST00000119935 606 ntBASIC13.04□□□□□ -0.32
Sf3b6P59708 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Gm27741-201ENSMUST00000185060 237 ntBASIC13.04□□□□□ -0.32
Sf3b6P59708 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Birc2-201ENSMUST00000054878 378 ntBASIC13.04□□□□□ -0.32
Sf3b6P59708 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sf3b6P59708 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sf3b6P59708 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.03□□□□□ -0.32
Sf3b6P59708 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm24589-201ENSMUST00000116692 94 ntBASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.03□□□□□ -0.32
Sf3b6P59708 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm27867-201ENSMUST00000184778 125 ntBASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.03□□□□□ -0.32
Sf3b6P59708 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sf3b6P59708 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sf3b6P59708 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Sf3b6P59708 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Sf3b6P59708 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sf3b6P59708 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Sf3b6P59708 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.02□□□□□ -0.32
Sf3b6P59708 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sf3b6P59708 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b6P59708 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b6P59708 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.02□□□□□ -0.33
Sf3b6P59708 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms