Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tpm1P58771 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.43■□□□□ 0.22
Tpm1P58771 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.42■□□□□ 0.22
Tpm1P58771 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tpm1P58771 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Tpm1P58771 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.42■□□□□ 0.22
Tpm1P58771 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tpm1P58771 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.42■□□□□ 0.22
Tpm1P58771 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Tpm1P58771 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tpm1P58771 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Tpm1P58771 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tpm1P58771 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tpm1P58771 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tpm1P58771 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpm1P58771 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.4■□□□□ 0.22
Tpm1P58771 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.4■□□□□ 0.22
Tpm1P58771 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.4■□□□□ 0.22
Tpm1P58771 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tpm1P58771 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.4■□□□□ 0.22
Tpm1P58771 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpm1P58771 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpm1P58771 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Tpm1P58771 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm1P58771 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Tpm1P58771 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Tpm1P58771 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpm1P58771 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpm1P58771 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms