Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.61□□□□□ -0.07
Atxn1P54254 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Atxn1P54254 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Atxn1P54254 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Atxn1P54254 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Atxn1P54254 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Atxn1P54254 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Atxn1P54254 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm15824-201ENSMUST00000119516 955 ntBASIC14.6□□□□□ -0.07
Atxn1P54254 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm24694-201ENSMUST00000180054 110 ntBASIC14.6□□□□□ -0.07
Atxn1P54254 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm27663-201ENSMUST00000184839 110 ntBASIC14.6□□□□□ -0.07
Atxn1P54254 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Atxn1P54254 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Atxn1P54254 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Atxn1P54254 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Atxn1P54254 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Atxn1P54254 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.59□□□□□ -0.07
Atxn1P54254 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Atxn1P54254 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.59□□□□□ -0.07
Atxn1P54254 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Atxn1P54254 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Atxn1P54254 Gm12091-201ENSMUST00000146791 830 ntBASIC14.59□□□□□ -0.07
Atxn1P54254 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.59□□□□□ -0.07
Atxn1P54254 Gm9908-201ENSMUST00000211534 448 ntBASIC14.59□□□□□ -0.07
Atxn1P54254 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Atxn1P54254 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Atxn1P54254 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.59□□□□□ -0.07
Atxn1P54254 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Atxn1P54254 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Atxn1P54254 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Atxn1P54254 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atxn1P54254 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atxn1P54254 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atxn1P54254 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.58□□□□□ -0.07
Atxn1P54254 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atxn1P54254 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Atxn1P54254 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.58□□□□□ -0.08
Atxn1P54254 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atxn1P54254 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Atxn1P54254 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.58□□□□□ -0.08
Atxn1P54254 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Atxn1P54254 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.58□□□□□ -0.08
Atxn1P54254 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.58□□□□□ -0.08
Atxn1P54254 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms