Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox3P53784 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox3P53784 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.11□□□□□ -0.15
Sox3P53784 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox3P53784 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sox3P53784 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Sox3P53784 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox3P53784 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox3P53784 Gm13223-201ENSMUST00000118609 747 ntBASIC14.1□□□□□ -0.15
Sox3P53784 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox3P53784 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox3P53784 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox3P53784 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sox3P53784 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox3P53784 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox3P53784 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox3P53784 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Gm25287-201ENSMUST00000103846 110 ntBASIC14.09□□□□□ -0.15
Sox3P53784 Gm22918-201ENSMUST00000103855 110 ntBASIC14.09□□□□□ -0.15
Sox3P53784 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Gm7653-201ENSMUST00000214567 508 ntBASIC14.09□□□□□ -0.15
Sox3P53784 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sox3P53784 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.09□□□□□ -0.15
Sox3P53784 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sox3P53784 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox3P53784 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sox3P53784 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox3P53784 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.08□□□□□ -0.15
Sox3P53784 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox3P53784 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox3P53784 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox3P53784 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox3P53784 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sox3P53784 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms