Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir125a-201ENSMUST00000083545 68 ntBASIC14.93□□□□□ -0.02
Sox1P53783 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.93□□□□□ -0.02
Sox1P53783 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox1P53783 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox1P53783 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.92□□□□□ -0.02
Sox1P53783 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Gm12585-201ENSMUST00000117307 290 ntBASIC14.92□□□□□ -0.02
Sox1P53783 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.92□□□□□ -0.02
Sox1P53783 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox1P53783 Gm5279-201ENSMUST00000199575 745 ntBASIC14.92□□□□□ -0.02
Sox1P53783 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox1P53783 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Sox1P53783 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox1P53783 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox1P53783 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox1P53783 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox1P53783 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Mir877-201ENSMUST00000104738 85 ntBASIC14.91□□□□□ -0.02
Sox1P53783 Gm13461-201ENSMUST00000120980 662 ntBASIC14.91□□□□□ -0.02
Sox1P53783 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Gm38266-201ENSMUST00000194931 421 ntBASIC14.91□□□□□ -0.02
Sox1P53783 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.91□□□□□ -0.02
Sox1P53783 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox1P53783 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox1P53783 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox1P53783 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox1P53783 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.9□□□□□ -0.02
Sox1P53783 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Gm26083-201ENSMUST00000157904 193 ntBASIC14.9□□□□□ -0.02
Sox1P53783 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.9□□□□□ -0.02
Sox1P53783 Gm7287-201ENSMUST00000205267 602 ntBASIC14.9□□□□□ -0.02
Sox1P53783 Gm6916-202ENSMUST00000205523 195 ntBASIC14.9□□□□□ -0.02
Sox1P53783 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sox1P53783 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.9□□□□□ -0.02
Sox1P53783 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox1P53783 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.89□□□□□ -0.03
Sox1P53783 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms