Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccl11P48298 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccl11P48298 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccl11P48298 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.44□□□□□ -0.42
Ccl11P48298 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccl11P48298 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccl11P48298 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl11P48298 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl11P48298 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccl11P48298 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Gm13464-201ENSMUST00000119418 935 ntBASIC12.43□□□□□ -0.42
Ccl11P48298 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccl11P48298 Gm27618-201ENSMUST00000183671 60 ntBASIC12.43□□□□□ -0.42
Ccl11P48298 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl11P48298 Gm45098-201ENSMUST00000207179 657 ntBASIC12.43□□□□□ -0.42
Ccl11P48298 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.43□□□□□ -0.42
Ccl11P48298 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl11P48298 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.42□□□□□ -0.42
Ccl11P48298 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.42□□□□□ -0.42
Ccl11P48298 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.42□□□□□ -0.42
Ccl11P48298 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Gm29541-201ENSMUST00000191351 678 ntBASIC12.42□□□□□ -0.42
Ccl11P48298 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl11P48298 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl11P48298 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Ccl11P48298 Asic1-205ENSMUST00000228185 1818 ntBASIC12.41□□□□□ -0.42
Ccl11P48298 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl11P48298 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl11P48298 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl11P48298 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl11P48298 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl11P48298 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms