Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Xcl1P47993 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Xcl1P47993 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.55□□□□□ -0.88
Xcl1P47993 AC120002.2-201ENSMUST00000220205 773 ntBASIC9.55□□□□□ -0.88
Xcl1P47993 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.55□□□□□ -0.88
Xcl1P47993 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.55□□□□□ -0.88
Xcl1P47993 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Xcl1P47993 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Xcl1P47993 AC132265.1-201ENSMUST00000219233 1665 ntBASIC9.55□□□□□ -0.88
Xcl1P47993 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.54□□□□□ -0.88
Xcl1P47993 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Xcl1P47993 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC9.54□□□□□ -0.88
Xcl1P47993 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.54□□□□□ -0.88
Xcl1P47993 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.54□□□□□ -0.88
Xcl1P47993 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Xcl1P47993 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Xcl1P47993 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC9.53□□□□□ -0.88
Xcl1P47993 Gm6858-201ENSMUST00000208582 1468 ntBASIC9.53□□□□□ -0.88
Xcl1P47993 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Xcl1P47993 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.53□□□□□ -0.88
Xcl1P47993 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Xcl1P47993 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC9.53□□□□□ -0.88
Xcl1P47993 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Xcl1P47993 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms