Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Msh2P43247 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Msh2P43247 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Msh2P43247 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Msh2P43247 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh2P43247 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Msh2P43247 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Gm11764-201ENSMUST00000120221 623 ntBASIC15.16■□□□□ 0.02
Msh2P43247 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.16■□□□□ 0.02
Msh2P43247 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.16■□□□□ 0.02
Msh2P43247 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.16■□□□□ 0.02
Msh2P43247 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.16■□□□□ 0.02
Msh2P43247 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.16■□□□□ 0.02
Msh2P43247 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Msh2P43247 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Msh2P43247 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Gm44771-201ENSMUST00000206975 626 ntBASIC15.15■□□□□ 0.02
Msh2P43247 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Msh2P43247 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.15■□□□□ 0.02
Msh2P43247 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Msh2P43247 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.15■□□□□ 0.02
Msh2P43247 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Msh2P43247 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh2P43247 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.14■□□□□ 0.01
Msh2P43247 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.14■□□□□ 0.01
Msh2P43247 Gm18489-201ENSMUST00000172565 551 ntBASIC15.14■□□□□ 0.01
Msh2P43247 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.14■□□□□ 0.01
Msh2P43247 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.14■□□□□ 0.01
Msh2P43247 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.14■□□□□ 0.01
Msh2P43247 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.14■□□□□ 0.01
Msh2P43247 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.14■□□□□ 0.01
Msh2P43247 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh2P43247 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.13■□□□□ 0.01
Msh2P43247 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh2P43247 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Msh2P43247 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.13■□□□□ 0.01
Msh2P43247 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh2P43247 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh2P43247 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh2P43247 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms