Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx2P43241 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdx2P43241 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdx2P43241 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdx2P43241 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdx2P43241 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Gm11918-201ENSMUST00000121660 179 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Cdx2P43241 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 Mir6392-201ENSMUST00000184924 108 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdx2P43241 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.9□□□□□ -0.18
Cdx2P43241 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdx2P43241 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdx2P43241 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.9□□□□□ -0.19
Cdx2P43241 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdx2P43241 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cdx2P43241 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 AA619741-201ENSMUST00000195095 646 ntBASIC13.89□□□□□ -0.19
Cdx2P43241 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdx2P43241 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdx2P43241 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdx2P43241 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdx2P43241 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Cdx2P43241 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdx2P43241 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm6916-202ENSMUST00000205523 195 ntBASIC13.88□□□□□ -0.19
Cdx2P43241 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdx2P43241 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.88□□□□□ -0.19
Cdx2P43241 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdx2P43241 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdx2P43241 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms