Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nckap1P28660 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nckap1P28660 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.62□□□□□ -0.07
Nckap1P28660 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Nckap1P28660 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nckap1P28660 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.62□□□□□ -0.07
Nckap1P28660 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.62□□□□□ -0.07
Nckap1P28660 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Gm13223-201ENSMUST00000118609 747 ntBASIC14.62□□□□□ -0.07
Nckap1P28660 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Gm27989-201ENSMUST00000184721 107 ntBASIC14.62□□□□□ -0.07
Nckap1P28660 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.62□□□□□ -0.07
Nckap1P28660 Gm18766-201ENSMUST00000189811 808 ntBASIC14.62□□□□□ -0.07
Nckap1P28660 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.62□□□□□ -0.07
Nckap1P28660 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.62□□□□□ -0.07
Nckap1P28660 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Nckap1P28660 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nckap1P28660 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.62□□□□□ -0.07
Nckap1P28660 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nckap1P28660 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.61□□□□□ -0.07
Nckap1P28660 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm12428-201ENSMUST00000119844 727 ntBASIC14.61□□□□□ -0.07
Nckap1P28660 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm27306-201ENSMUST00000183970 107 ntBASIC14.61□□□□□ -0.07
Nckap1P28660 Gm29541-201ENSMUST00000191351 678 ntBASIC14.61□□□□□ -0.07
Nckap1P28660 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.61□□□□□ -0.07
Nckap1P28660 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nckap1P28660 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nckap1P28660 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Nckap1P28660 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nckap1P28660 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Nckap1P28660 Gm12151-201ENSMUST00000121374 290 ntBASIC14.6□□□□□ -0.07
Nckap1P28660 Gm14767-201ENSMUST00000121559 586 ntBASIC14.6□□□□□ -0.07
Nckap1P28660 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.6□□□□□ -0.07
Nckap1P28660 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nckap1P28660 Gm28630-201ENSMUST00000187806 498 ntBASIC14.6□□□□□ -0.07
Nckap1P28660 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms