Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Irf8P23611 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.83■□□□□ 0.13
Irf8P23611 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Irf8P23611 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Irf8P23611 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.83■□□□□ 0.12
Irf8P23611 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Gm25287-201ENSMUST00000103846 110 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Gm22918-201ENSMUST00000103855 110 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Gm6736-201ENSMUST00000166583 948 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.83■□□□□ 0.12
Irf8P23611 Gm27702-201ENSMUST00000184512 56 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Gm38225-201ENSMUST00000194001 393 ntBASIC15.83■□□□□ 0.12
Irf8P23611 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.83■□□□□ 0.12
Irf8P23611 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.83■□□□□ 0.12
Irf8P23611 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.83■□□□□ 0.12
Irf8P23611 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Irf8P23611 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.82■□□□□ 0.12
Irf8P23611 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.82■□□□□ 0.12
Irf8P23611 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.82■□□□□ 0.12
Irf8P23611 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Irf8P23611 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Irf8P23611 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Irf8P23611 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.82■□□□□ 0.12
Irf8P23611 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.82■□□□□ 0.12
Irf8P23611 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Irf8P23611 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.81■□□□□ 0.12
Irf8P23611 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.81■□□□□ 0.12
Irf8P23611 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.81■□□□□ 0.12
Irf8P23611 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.81■□□□□ 0.12
Irf8P23611 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.81■□□□□ 0.12
Irf8P23611 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Irf8P23611 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Irf8P23611 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Irf8P23611 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Irf8P23611 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.8■□□□□ 0.12
Irf8P23611 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Irf8P23611 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.8■□□□□ 0.12
Irf8P23611 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.8■□□□□ 0.12
Irf8P23611 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.8■□□□□ 0.12
Irf8P23611 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.8■□□□□ 0.12
Irf8P23611 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Irf8P23611 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms