Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Tpm3P21107 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm3P21107 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.47■□□□□ 0.23
Tpm3P21107 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Tpm3P21107 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tpm3P21107 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm3P21107 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Gm6433-201ENSMUST00000118634 875 ntBASIC16.47■□□□□ 0.23
Tpm3P21107 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.47■□□□□ 0.23
Tpm3P21107 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tpm3P21107 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.47■□□□□ 0.23
Tpm3P21107 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm3P21107 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.47■□□□□ 0.23
Tpm3P21107 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm3P21107 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.46■□□□□ 0.23
Tpm3P21107 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.46■□□□□ 0.23
Tpm3P21107 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.46■□□□□ 0.23
Tpm3P21107 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Tpm3P21107 Gm8318-201ENSMUST00000182954 872 ntBASIC16.46■□□□□ 0.23
Tpm3P21107 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Gm43767-201ENSMUST00000198933 381 ntBASIC16.46■□□□□ 0.23
Tpm3P21107 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.46■□□□□ 0.23
Tpm3P21107 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.46■□□□□ 0.23
Tpm3P21107 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm3P21107 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tpm3P21107 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tpm3P21107 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tpm3P21107 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.46■□□□□ 0.22
Tpm3P21107 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.46■□□□□ 0.22
Tpm3P21107 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.45■□□□□ 0.22
Tpm3P21107 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.45■□□□□ 0.22
Tpm3P21107 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.45■□□□□ 0.22
Tpm3P21107 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm3P21107 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tpm3P21107 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms