Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.22□□□□□ -0.13
Fv4P11370 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Fv4P11370 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.22□□□□□ -0.13
Fv4P11370 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.22□□□□□ -0.13
Fv4P11370 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.22□□□□□ -0.13
Fv4P11370 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.22□□□□□ -0.13
Fv4P11370 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Fv4P11370 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.21□□□□□ -0.13
Fv4P11370 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Fv4P11370 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.21□□□□□ -0.13
Fv4P11370 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.21□□□□□ -0.13
Fv4P11370 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.21□□□□□ -0.13
Fv4P11370 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Fv4P11370 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Fv4P11370 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Fv4P11370 Mir5126-201ENSMUST00000175513 77 ntBASIC14.21□□□□□ -0.13
Fv4P11370 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Fv4P11370 Gm2272-201ENSMUST00000194903 582 ntBASIC14.21□□□□□ -0.13
Fv4P11370 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fv4P11370 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.21□□□□□ -0.14
Fv4P11370 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Fv4P11370 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fv4P11370 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Fv4P11370 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.2□□□□□ -0.14
Fv4P11370 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.2□□□□□ -0.14
Fv4P11370 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.2□□□□□ -0.14
Fv4P11370 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.2□□□□□ -0.14
Fv4P11370 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.2□□□□□ -0.14
Fv4P11370 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fv4P11370 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.19□□□□□ -0.14
Fv4P11370 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Fv4P11370 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.19□□□□□ -0.14
Fv4P11370 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fv4P11370 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms