Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.79□□□□□ -0.2
Nid1P10493 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nid1P10493 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.79□□□□□ -0.2
Nid1P10493 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.79□□□□□ -0.2
Nid1P10493 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.79□□□□□ -0.2
Nid1P10493 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.79□□□□□ -0.2
Nid1P10493 Gm10154-201ENSMUST00000084445 354 ntBASIC13.79□□□□□ -0.2
Nid1P10493 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nid1P10493 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.79□□□□□ -0.2
Nid1P10493 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nid1P10493 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nid1P10493 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.78□□□□□ -0.2
Nid1P10493 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.78□□□□□ -0.2
Nid1P10493 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.78□□□□□ -0.2
Nid1P10493 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.78□□□□□ -0.2
Nid1P10493 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nid1P10493 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nid1P10493 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nid1P10493 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.77□□□□□ -0.2
Nid1P10493 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nid1P10493 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nid1P10493 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Nid1P10493 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nid1P10493 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 Gm5177-201ENSMUST00000183092 997 ntBASIC13.77□□□□□ -0.21
Nid1P10493 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nid1P10493 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.77□□□□□ -0.21
Nid1P10493 Thap2-203ENSMUST00000218989 527 ntBASIC13.77□□□□□ -0.21
Nid1P10493 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Nid1P10493 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nid1P10493 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nid1P10493 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nid1P10493 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.76□□□□□ -0.21
Nid1P10493 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nid1P10493 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nid1P10493 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.76□□□□□ -0.21
Nid1P10493 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms